Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhb11Q91UZ8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Gm5177-201ENSMUST00000183092 997 ntBASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Gm17968-201ENSMUST00000194902 784 ntBASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb11Q91UZ8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Gm12260-201ENSMUST00000122447 411 ntBASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Gm43514-201ENSMUST00000198852 424 ntBASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Pcdhb11Q91UZ8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb11Q91UZ8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Gm2272-201ENSMUST00000194903 582 ntBASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms