Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh18Q8VHR0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.47□□□□□ -0.09
Pcdh18Q8VHR0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Rprl3-201ENSMUST00000157400 290 ntBASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh18Q8VHR0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh18Q8VHR0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms