Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpa1Q8VEE4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Carlr-201ENSMUST00000181515 2574 ntBASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rpa1Q8VEE4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rpa1Q8VEE4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms