Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rpap2Q8VC34 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Mir8117-201ENSMUST00000184773 107 ntBASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rpap2Q8VC34 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Gm12260-201ENSMUST00000122447 411 ntBASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Gm45747-201ENSMUST00000212203 999 ntBASIC16.4■□□□□ 0.22
Rpap2Q8VC34 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Gm10154-201ENSMUST00000084445 354 ntBASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpap2Q8VC34 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
Rpap2Q8VC34 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.39■□□□□ 0.22
Rpap2Q8VC34 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Rpap2Q8VC34 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Gm16026-204ENSMUST00000162652 683 ntBASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Gm27525-201ENSMUST00000184465 107 ntBASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.39■□□□□ 0.21
Rpap2Q8VC34 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpap2Q8VC34 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpap2Q8VC34 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpap2Q8VC34 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpap2Q8VC34 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpap2Q8VC34 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms