Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.02■□□□□ -0
Vps39Q8R5L3 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.02■□□□□ -0
Vps39Q8R5L3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.02■□□□□ -0
Vps39Q8R5L3 Gm34391-201ENSMUST00000203706 907 ntBASIC15.02■□□□□ -0
Vps39Q8R5L3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Rps4l-201ENSMUST00000071745 943 ntBASIC15.02■□□□□ -0
Vps39Q8R5L3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps39Q8R5L3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps39Q8R5L3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps39Q8R5L3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Vps39Q8R5L3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps39Q8R5L3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps39Q8R5L3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps39Q8R5L3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.02□□□□□ -0.01
Vps39Q8R5L3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps39Q8R5L3 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Gm6376-201ENSMUST00000209407 580 ntBASIC15.01□□□□□ -0.01
Vps39Q8R5L3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps39Q8R5L3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15□□□□□ -0.01
Vps39Q8R5L3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps39Q8R5L3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps39Q8R5L3 Gm9682-201ENSMUST00000197505 556 ntBASIC15□□□□□ -0.01
Vps39Q8R5L3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15□□□□□ -0.01
Vps39Q8R5L3 Gm7787-201ENSMUST00000216858 688 ntBASIC15□□□□□ -0.01
Vps39Q8R5L3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Mxra8os-201ENSMUST00000097740 687 ntBASIC15□□□□□ -0.01
Vps39Q8R5L3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps39Q8R5L3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15□□□□□ -0.01
Vps39Q8R5L3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Vps39Q8R5L3 Gm37736-201ENSMUST00000193564 2802 ntBASIC15□□□□□ -0.01
Vps39Q8R5L3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps39Q8R5L3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Vps39Q8R5L3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15□□□□□ -0.01
Vps39Q8R5L3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vps39Q8R5L3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Gm43767-201ENSMUST00000198933 381 ntBASIC14.99□□□□□ -0.01
Vps39Q8R5L3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.99□□□□□ -0.01
Vps39Q8R5L3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms