Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Nup85Q8R480 Gm10499-201ENSMUST00000174094 934 ntBASIC15.4■□□□□ 0.06
Nup85Q8R480 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.4■□□□□ 0.06
Nup85Q8R480 Gm2756-201ENSMUST00000195851 400 ntBASIC15.4■□□□□ 0.06
Nup85Q8R480 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Nup85Q8R480 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.4■□□□□ 0.06
Nup85Q8R480 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Nup85Q8R480 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup85Q8R480 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Nup85Q8R480 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nup85Q8R480 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Gm6736-201ENSMUST00000166583 948 ntBASIC15.39■□□□□ 0.05
Nup85Q8R480 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
Nup85Q8R480 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nup85Q8R480 Gm27702-201ENSMUST00000184512 56 ntBASIC15.39■□□□□ 0.05
Nup85Q8R480 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.39■□□□□ 0.05
Nup85Q8R480 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.39■□□□□ 0.05
Nup85Q8R480 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.39■□□□□ 0.05
Nup85Q8R480 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Gm7787-201ENSMUST00000216858 688 ntBASIC15.39■□□□□ 0.05
Nup85Q8R480 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nup85Q8R480 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.39■□□□□ 0.05
Nup85Q8R480 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nup85Q8R480 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup85Q8R480 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.38■□□□□ 0.05
Nup85Q8R480 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Nup85Q8R480 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.38■□□□□ 0.05
Nup85Q8R480 Mir8117-201ENSMUST00000184773 107 ntBASIC15.38■□□□□ 0.05
Nup85Q8R480 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.38■□□□□ 0.05
Nup85Q8R480 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Nup85Q8R480 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Nup85Q8R480 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.38■□□□□ 0.05
Nup85Q8R480 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup85Q8R480 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Nup85Q8R480 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Nup85Q8R480 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Nup85Q8R480 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.37■□□□□ 0.05
Nup85Q8R480 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.37■□□□□ 0.05
Nup85Q8R480 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.37■□□□□ 0.05
Nup85Q8R480 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.37■□□□□ 0.05
Nup85Q8R480 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.37■□□□□ 0.05
Nup85Q8R480 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.37■□□□□ 0.05
Nup85Q8R480 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Nup85Q8R480 Gm4899-201ENSMUST00000178708 719 ntBASIC15.37■□□□□ 0.05
Nup85Q8R480 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.37■□□□□ 0.05
Nup85Q8R480 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.37■□□□□ 0.05
Nup85Q8R480 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.37■□□□□ 0.05
Nup85Q8R480 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms