Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Hist1h2al-201ENSMUST00000091708 339 ntBASIC21.07■□□□□ 0.96
Cd109Q8R422 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Cd109Q8R422 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC21.06■□□□□ 0.96
Cd109Q8R422 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
Cd109Q8R422 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Cd109Q8R422 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cd109Q8R422 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cd109Q8R422 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC21.06■□□□□ 0.96
Cd109Q8R422 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cd109Q8R422 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cd109Q8R422 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Cd109Q8R422 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cd109Q8R422 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC21.05■□□□□ 0.96
Cd109Q8R422 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cd109Q8R422 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC21.05■□□□□ 0.96
Cd109Q8R422 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC21.05■□□□□ 0.96
Cd109Q8R422 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd109Q8R422 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC21.05■□□□□ 0.96
Cd109Q8R422 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC21.04■□□□□ 0.96
Cd109Q8R422 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC21.04■□□□□ 0.96
Cd109Q8R422 Gm9182-201ENSMUST00000217829 639 ntBASIC21.04■□□□□ 0.96
Cd109Q8R422 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cd109Q8R422 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cd109Q8R422 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd109Q8R422 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd109Q8R422 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cd109Q8R422 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd109Q8R422 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd109Q8R422 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cd109Q8R422 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd109Q8R422 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd109Q8R422 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC21.04■□□□□ 0.96
Cd109Q8R422 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC21.04■□□□□ 0.96
Cd109Q8R422 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cd109Q8R422 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC21.04■□□□□ 0.96
Cd109Q8R422 Gm6218-201ENSMUST00000219812 628 ntBASIC21.04■□□□□ 0.96
Cd109Q8R422 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd109Q8R422 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd109Q8R422 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd109Q8R422 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cd109Q8R422 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC21.03■□□□□ 0.96
Cd109Q8R422 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 AC156016.3-201ENSMUST00000228623 344 ntBASIC21.03■□□□□ 0.96
Cd109Q8R422 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd109Q8R422 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Cd109Q8R422 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd109Q8R422 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms