Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacnb1Q8R3Z5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacnb1Q8R3Z5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacnb1Q8R3Z5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacnb1Q8R3Z5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cacnb1Q8R3Z5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacnb1Q8R3Z5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacnb1Q8R3Z5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacnb1Q8R3Z5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Cacnb1Q8R3Z5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cacnb1Q8R3Z5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Gm12372-201ENSMUST00000121654 768 ntBASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacnb1Q8R3Z5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Gm14358-201ENSMUST00000118458 403 ntBASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Rps4l-201ENSMUST00000071745 943 ntBASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacnb1Q8R3Z5 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Gm25990-201ENSMUST00000102440 86 ntBASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Gm16411-201ENSMUST00000122164 1100 ntBASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Gm14126-201ENSMUST00000122345 395 ntBASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Gm16285-201ENSMUST00000162999 347 ntBASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Gm28659-201ENSMUST00000188013 759 ntBASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.18■□□□□ 0.34
Cacnb1Q8R3Z5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms