Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm21722-201ENSMUST00000190153 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm28423-201ENSMUST00000190701 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21899-201ENSMUST00000190745 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21910-201ENSMUST00000191163 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21849-201ENSMUST00000191571 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm28678-201ENSMUST00000191593 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm20910-201ENSMUST00000193268 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21871-201ENSMUST00000194621 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Dupd1-202ENSMUST00000224735 548 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.86■□□□□ 0.29
Syne4Q8CII8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Gm9522-201ENSMUST00000182394 926 ntBASIC16.86■□□□□ 0.29
Syne4Q8CII8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne4Q8CII8 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.86■□□□□ 0.29
Syne4Q8CII8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.86■□□□□ 0.29
Syne4Q8CII8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Syne4Q8CII8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Gm22189-201ENSMUST00000103822 86 ntBASIC16.85■□□□□ 0.29
Syne4Q8CII8 Gm6222-201ENSMUST00000120787 396 ntBASIC16.85■□□□□ 0.29
Syne4Q8CII8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Gm27631-201ENSMUST00000184163 466 ntBASIC16.85■□□□□ 0.29
Syne4Q8CII8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Gm45098-201ENSMUST00000207179 657 ntBASIC16.85■□□□□ 0.29
Syne4Q8CII8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Syne4Q8CII8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.84■□□□□ 0.29
Syne4Q8CII8 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.84■□□□□ 0.29
Syne4Q8CII8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Syne4Q8CII8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Syne4Q8CII8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Syne4Q8CII8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syne4Q8CII8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syne4Q8CII8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syne4Q8CII8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Syne4Q8CII8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Syne4Q8CII8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Syne4Q8CII8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms