Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.12■□□□□ 0.01
Clip4Q8CI96 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.11■□□□□ 0.01
Clip4Q8CI96 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Clip4Q8CI96 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Gm15358-201ENSMUST00000119249 520 ntBASIC15.11■□□□□ 0.01
Clip4Q8CI96 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.11■□□□□ 0.01
Clip4Q8CI96 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clip4Q8CI96 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Gm13036-201ENSMUST00000117799 748 ntBASIC15.1■□□□□ 0.01
Clip4Q8CI96 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clip4Q8CI96 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.09■□□□□ 0.01
Clip4Q8CI96 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.09■□□□□ 0.01
Clip4Q8CI96 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clip4Q8CI96 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms