Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm22619-201ENSMUST00000179516 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm25255-201ENSMUST00000179579 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm24755-201ENSMUST00000179691 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm26506-201ENSMUST00000179692 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm25086-201ENSMUST00000179931 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm23243-201ENSMUST00000180047 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm24659-201ENSMUST00000180212 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm24169-201ENSMUST00000180244 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm23689-201ENSMUST00000180354 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm27359-201ENSMUST00000184153 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm27785-201ENSMUST00000184268 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm27466-201ENSMUST00000184396 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm27703-201ENSMUST00000184836 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Smc4Q8CG47 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Gm13616-201ENSMUST00000120600 222 ntBASIC18.42■□□□□ 0.54
Smc4Q8CG47 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Gm38225-201ENSMUST00000194001 393 ntBASIC18.42■□□□□ 0.54
Smc4Q8CG47 Gm10253-201ENSMUST00000194270 940 ntBASIC18.42■□□□□ 0.54
Smc4Q8CG47 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.42■□□□□ 0.54
Smc4Q8CG47 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.42■□□□□ 0.54
Smc4Q8CG47 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smc4Q8CG47 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Mir449b-201ENSMUST00000104833 80 ntBASIC18.41■□□□□ 0.54
Smc4Q8CG47 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.41■□□□□ 0.54
Smc4Q8CG47 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.41■□□□□ 0.54
Smc4Q8CG47 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.41■□□□□ 0.54
Smc4Q8CG47 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.41■□□□□ 0.54
Smc4Q8CG47 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smc4Q8CG47 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Sybu-209ENSMUST00000228639 4113 ntBASIC18.4■□□□□ 0.54
Smc4Q8CG47 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.4■□□□□ 0.54
Smc4Q8CG47 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.4■□□□□ 0.54
Smc4Q8CG47 Gm15483-201ENSMUST00000120338 456 ntBASIC18.4■□□□□ 0.54
Smc4Q8CG47 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Gm7774-201ENSMUST00000200064 533 ntBASIC18.4■□□□□ 0.54
Smc4Q8CG47 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.4■□□□□ 0.54
Smc4Q8CG47 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.4■□□□□ 0.54
Smc4Q8CG47 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.4■□□□□ 0.54
Smc4Q8CG47 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.4■□□□□ 0.54
Smc4Q8CG47 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smc4Q8CG47 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms