Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC18.54■□□□□ 0.56
Smc5Q8CG46 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc5Q8CG46 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc5Q8CG46 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc5Q8CG46 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.54■□□□□ 0.56
Smc5Q8CG46 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.53■□□□□ 0.56
Smc5Q8CG46 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Smc5Q8CG46 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Gm6089-201ENSMUST00000197666 938 ntBASIC18.53■□□□□ 0.56
Smc5Q8CG46 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc5Q8CG46 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc5Q8CG46 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.52■□□□□ 0.56
Smc5Q8CG46 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.52■□□□□ 0.56
Smc5Q8CG46 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Smc5Q8CG46 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.52■□□□□ 0.56
Smc5Q8CG46 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smc5Q8CG46 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smc5Q8CG46 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smc5Q8CG46 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.52■□□□□ 0.55
Smc5Q8CG46 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smc5Q8CG46 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smc5Q8CG46 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.51■□□□□ 0.55
Smc5Q8CG46 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.51■□□□□ 0.55
Smc5Q8CG46 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc5Q8CG46 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.51■□□□□ 0.55
Smc5Q8CG46 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc5Q8CG46 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.5■□□□□ 0.55
Smc5Q8CG46 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms