Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm25911-201ENSMUST00000157621 56 ntBASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.68■□□□□ 0.42
Nup88Q8CEC0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nup88Q8CEC0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nup88Q8CEC0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Gm8344-201ENSMUST00000119813 856 ntBASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Nup88Q8CEC0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms