Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smim4Q8C1Q6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Efs-202ENSMUST00000227037 2540 ntBASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Gm6296-201ENSMUST00000222599 943 ntBASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smim4Q8C1Q6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Gm4535-201ENSMUST00000182274 558 ntBASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Gm27646-201ENSMUST00000183989 110 ntBASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Gm10355-201ENSMUST00000097146 517 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms