Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nek11Q8C0Q4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nek11Q8C0Q4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Nek11Q8C0Q4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nek11Q8C0Q4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nek11Q8C0Q4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nek11Q8C0Q4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms