Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Gm13464-201ENSMUST00000119418 935 ntBASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Scfd1Q8BRF7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.05■□□□□ 0.32
Scfd1Q8BRF7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Gm13223-201ENSMUST00000118609 747 ntBASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Gm18766-201ENSMUST00000189811 808 ntBASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scfd1Q8BRF7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scfd1Q8BRF7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms