Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Gm12895-201ENSMUST00000122214 226 ntBASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdhr3Q8BL00 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Gm13836-201ENSMUST00000121159 501 ntBASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Gm10499-201ENSMUST00000174094 934 ntBASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdhr3Q8BL00 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Gm23547-201ENSMUST00000158210 271 ntBASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Gm27646-201ENSMUST00000183989 110 ntBASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdhr3Q8BL00 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.08□□□□□ -0.31
Cdhr3Q8BL00 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdhr3Q8BL00 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.08□□□□□ -0.31
Cdhr3Q8BL00 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cdhr3Q8BL00 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdhr3Q8BL00 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdhr3Q8BL00 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms