Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Gm27731-201ENSMUST00000185192 107 ntBASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Mir6392-201ENSMUST00000184924 108 ntBASIC12.49□□□□□ -0.41
Smg1Q8BKX6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.49□□□□□ -0.41
Smg1Q8BKX6 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Gm5187-201ENSMUST00000117317 991 ntBASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smg1Q8BKX6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smg1Q8BKX6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smg1Q8BKX6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smg1Q8BKX6 Gm13350-201ENSMUST00000120519 479 ntBASIC12.47□□□□□ -0.41
Smg1Q8BKX6 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.47□□□□□ -0.41
Smg1Q8BKX6 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms