Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srrm4Q8BKA3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Gm15467-201ENSMUST00000120582 445 ntBASIC13□□□□□ -0.33
Srrm4Q8BKA3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13□□□□□ -0.33
Srrm4Q8BKA3 Gm8000-201ENSMUST00000188378 592 ntBASIC13□□□□□ -0.33
Srrm4Q8BKA3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Gm5264-201ENSMUST00000190584 848 ntBASIC13□□□□□ -0.33
Srrm4Q8BKA3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Gm11839-201ENSMUST00000120647 1953 ntBASIC13□□□□□ -0.33
Srrm4Q8BKA3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srrm4Q8BKA3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Srrm4Q8BKA3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srrm4Q8BKA3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms