Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Gm17971-201ENSMUST00000190239 806 ntBASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Rps4l-201ENSMUST00000071745 943 ntBASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Gm10819-201ENSMUST00000099988 561 ntBASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Gm13418-201ENSMUST00000119097 944 ntBASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc40Q8BI79 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Gm25990-201ENSMUST00000102440 86 ntBASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Gm7153-201ENSMUST00000117092 455 ntBASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc40Q8BI79 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Gm8318-201ENSMUST00000182954 872 ntBASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Gm6089-201ENSMUST00000197666 938 ntBASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc40Q8BI79 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms