Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Gm27389-201ENSMUST00000183622 195 ntBASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Slc5a7Q8BGY9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Gm18101-201ENSMUST00000215769 548 ntBASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc5a7Q8BGY9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gm11355-201ENSMUST00000121120 306 ntBASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gm8520-201ENSMUST00000186517 868 ntBASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gm21559-201ENSMUST00000220638 855 ntBASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gm8587-201ENSMUST00000076538 843 ntBASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Grk6-207ENSMUST00000225925 2769 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms