Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Gm9797-201ENSMUST00000052902 613 ntBASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Gm9522-201ENSMUST00000182394 926 ntBASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Gm3786-201ENSMUST00000202659 378 ntBASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Gm46209-201ENSMUST00000217912 553 ntBASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.49□□□□□ -0.41
Ttc28Q80XJ3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Gm5035-201ENSMUST00000215581 927 ntBASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Gm15823-201ENSMUST00000064305 670 ntBASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ttc28Q80XJ3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 App-207ENSMUST00000227737 2827 ntBASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.47□□□□□ -0.41
Ttc28Q80XJ3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms