Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpap1Q80TE0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rpap1Q80TE0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpap1Q80TE0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpap1Q80TE0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpap1Q80TE0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC22.98■■□□□ 1.27
Rpap1Q80TE0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Rpap1Q80TE0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpap1Q80TE0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpap1Q80TE0 AA619741-201ENSMUST00000195095 646 ntBASIC22.98■■□□□ 1.27
Rpap1Q80TE0 AC162801.1-201ENSMUST00000220612 198 ntBASIC22.98■■□□□ 1.27
Rpap1Q80TE0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 AC153962.4-201ENSMUST00000217878 242 ntBASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Mir125a-201ENSMUST00000083545 68 ntBASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rpap1Q80TE0 BC001981-202ENSMUST00000191393 1545 ntBASIC22.97■■□□□ 1.27
Rpap1Q80TE0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Gm6007-201ENSMUST00000208170 823 ntBASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rpap1Q80TE0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
Rpap1Q80TE0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Rpap1Q80TE0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Gm43630-201ENSMUST00000201550 776 ntBASIC22.95■■□□□ 1.26
Rpap1Q80TE0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Gm26917-202ENSMUST00000192833 3329 ntBASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rpap1Q80TE0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Gm30437-201ENSMUST00000206086 1201 ntBASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Gm5763-201ENSMUST00000155951 1530 ntBASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC22.94■■□□□ 1.26
Rpap1Q80TE0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Gm15678-201ENSMUST00000117573 960 ntBASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Gm5035-201ENSMUST00000215581 927 ntBASIC22.93■■□□□ 1.26
Rpap1Q80TE0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC22.93■■□□□ 1.26
Rpap1Q80TE0 AC238811.3-201ENSMUST00000225422 709 ntBASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rpap1Q80TE0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms