Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Gm12176-201ENSMUST00000121420 875 ntBASIC10.1□□□□□ -0.79
Csmd3Q80T79 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Csmd3Q80T79 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Csmd3Q80T79 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Csmd3Q80T79 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Csmd3Q80T79 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Csmd3Q80T79 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Csmd3Q80T79 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Csmd3Q80T79 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Csmd3Q80T79 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.1□□□□□ -0.79
Csmd3Q80T79 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.09□□□□□ -0.79
Csmd3Q80T79 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Gm22018-201ENSMUST00000104357 131 ntBASIC10.09□□□□□ -0.79
Csmd3Q80T79 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Gm28911-201ENSMUST00000188837 117 ntBASIC10.09□□□□□ -0.79
Csmd3Q80T79 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.09□□□□□ -0.79
Csmd3Q80T79 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.09□□□□□ -0.79
Csmd3Q80T79 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Gm8463-201ENSMUST00000208573 613 ntBASIC10.09□□□□□ -0.79
Csmd3Q80T79 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Csmd3Q80T79 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Gm4984-201ENSMUST00000115987 360 ntBASIC10.08□□□□□ -0.8
Csmd3Q80T79 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.08□□□□□ -0.8
Csmd3Q80T79 AA619741-201ENSMUST00000195095 646 ntBASIC10.08□□□□□ -0.8
Csmd3Q80T79 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.08□□□□□ -0.8
Csmd3Q80T79 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.08□□□□□ -0.8
Csmd3Q80T79 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Gm19220-201ENSMUST00000222682 803 ntBASIC10.08□□□□□ -0.8
Csmd3Q80T79 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Csmd3Q80T79 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.07□□□□□ -0.8
Csmd3Q80T79 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm13216-201ENSMUST00000117145 591 ntBASIC10.07□□□□□ -0.8
Csmd3Q80T79 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm37230-201ENSMUST00000194491 818 ntBASIC10.07□□□□□ -0.8
Csmd3Q80T79 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.07□□□□□ -0.8
Csmd3Q80T79 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 AC153526.5-201ENSMUST00000218661 2147 ntBASIC10.07□□□□□ -0.8
Csmd3Q80T79 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms