Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vma21Q78T54 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Vma21Q78T54 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.22□□□□□ -0.45
Vma21Q78T54 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Vma21Q78T54 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.22□□□□□ -0.45
Vma21Q78T54 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Vma21Q78T54 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vma21Q78T54 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.22□□□□□ -0.45
Vma21Q78T54 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vma21Q78T54 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.21□□□□□ -0.45
Vma21Q78T54 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.21□□□□□ -0.45
Vma21Q78T54 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Gm14859-201ENSMUST00000117752 357 ntBASIC12.21□□□□□ -0.45
Vma21Q78T54 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.21□□□□□ -0.45
Vma21Q78T54 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Gm33142-201ENSMUST00000193913 867 ntBASIC12.21□□□□□ -0.45
Vma21Q78T54 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vma21Q78T54 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vma21Q78T54 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Vma21Q78T54 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vma21Q78T54 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vma21Q78T54 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vma21Q78T54 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vma21Q78T54 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Vma21Q78T54 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.2□□□□□ -0.46
Vma21Q78T54 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vma21Q78T54 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vma21Q78T54 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.2□□□□□ -0.46
Vma21Q78T54 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Gm27357-201ENSMUST00000183754 135 ntBASIC12.2□□□□□ -0.46
Vma21Q78T54 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Vma21Q78T54 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.2□□□□□ -0.46
Vma21Q78T54 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.2□□□□□ -0.46
Vma21Q78T54 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.2□□□□□ -0.46
Vma21Q78T54 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.2□□□□□ -0.46
Vma21Q78T54 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vma21Q78T54 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vma21Q78T54 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.2□□□□□ -0.46
Vma21Q78T54 Celf4-206ENSMUST00000224553 1729 ntBASIC12.2□□□□□ -0.46
Vma21Q78T54 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vma21Q78T54 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms