Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.8■□□□□ 0.44
Sned1Q70E20 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.8■□□□□ 0.44
Sned1Q70E20 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.8■□□□□ 0.44
Sned1Q70E20 Gm7287-201ENSMUST00000205267 602 ntBASIC17.8■□□□□ 0.44
Sned1Q70E20 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sned1Q70E20 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.8■□□□□ 0.44
Sned1Q70E20 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.8■□□□□ 0.44
Sned1Q70E20 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.8■□□□□ 0.44
Sned1Q70E20 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.8■□□□□ 0.44
Sned1Q70E20 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.8■□□□□ 0.44
Sned1Q70E20 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sned1Q70E20 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sned1Q70E20 Gm6091-201ENSMUST00000098307 165 ntBASIC17.8■□□□□ 0.44
Sned1Q70E20 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Sned1Q70E20 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.79■□□□□ 0.44
Sned1Q70E20 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.79■□□□□ 0.44
Sned1Q70E20 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Sned1Q70E20 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sned1Q70E20 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.79■□□□□ 0.44
Sned1Q70E20 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.79■□□□□ 0.44
Sned1Q70E20 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Mir3102-201ENSMUST00000175555 104 ntBASIC17.79■□□□□ 0.44
Sned1Q70E20 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.79■□□□□ 0.44
Sned1Q70E20 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Sned1Q70E20 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sned1Q70E20 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sned1Q70E20 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.78■□□□□ 0.44
Sned1Q70E20 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.78■□□□□ 0.44
Sned1Q70E20 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.78■□□□□ 0.44
Sned1Q70E20 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.78■□□□□ 0.44
Sned1Q70E20 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.78■□□□□ 0.44
Sned1Q70E20 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Sned1Q70E20 Gm9726-201ENSMUST00000180321 678 ntBASIC17.78■□□□□ 0.44
Sned1Q70E20 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.78■□□□□ 0.44
Sned1Q70E20 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sned1Q70E20 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sned1Q70E20 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sned1Q70E20 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sned1Q70E20 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sned1Q70E20 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.77■□□□□ 0.44
Sned1Q70E20 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sned1Q70E20 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Gm15240-201ENSMUST00000118156 720 ntBASIC17.77■□□□□ 0.44
Sned1Q70E20 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.77■□□□□ 0.44
Sned1Q70E20 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Gm10275-202ENSMUST00000168697 495 ntBASIC17.77■□□□□ 0.44
Sned1Q70E20 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sned1Q70E20 Gm10275-201ENSMUST00000092620 635 ntBASIC17.77■□□□□ 0.44
Sned1Q70E20 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sned1Q70E20 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sned1Q70E20 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sned1Q70E20 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Sned1Q70E20 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sned1Q70E20 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sned1Q70E20 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sned1Q70E20 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms