Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Gm27622-201ENSMUST00000183779 60 ntBASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Gm10253-201ENSMUST00000194270 940 ntBASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npc1l1Q6T3U4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Npc1l1Q6T3U4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Npc1l1Q6T3U4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Npc1l1Q6T3U4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Npc1l1Q6T3U4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.89■□□□□ 0.46
Npc1l1Q6T3U4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Npc1l1Q6T3U4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Npc1l1Q6T3U4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Gm2810-201ENSMUST00000118681 990 ntBASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Gm24158-201ENSMUST00000175263 71 ntBASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.89■□□□□ 0.45
Npc1l1Q6T3U4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Npc1l1Q6T3U4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms