Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Gm13015-201ENSMUST00000118674 204 ntBASIC18.48■□□□□ 0.55
Ddx58Q6Q899 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Gm18049-201ENSMUST00000208909 581 ntBASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx58Q6Q899 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ddx58Q6Q899 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx58Q6Q899 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Gm6415-201ENSMUST00000118488 348 ntBASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Gm13464-201ENSMUST00000119418 935 ntBASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Gm5479-201ENSMUST00000160578 435 ntBASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ddx58Q6Q899 Gm29541-201ENSMUST00000191351 678 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms