Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Gm15678-201ENSMUST00000117573 960 ntBASIC12.59□□□□□ -0.39
Rif1Q6PR54 Gm14722-201ENSMUST00000118943 689 ntBASIC12.59□□□□□ -0.39
Rif1Q6PR54 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Proscos-202ENSMUST00000178990 666 ntBASIC12.59□□□□□ -0.39
Rif1Q6PR54 Gm43822-201ENSMUST00000200285 476 ntBASIC12.59□□□□□ -0.39
Rif1Q6PR54 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rif1Q6PR54 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rif1Q6PR54 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Rif1Q6PR54 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.58□□□□□ -0.4
Rif1Q6PR54 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.58□□□□□ -0.4
Rif1Q6PR54 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rif1Q6PR54 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.57□□□□□ -0.4
Rif1Q6PR54 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Rif1Q6PR54 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.57□□□□□ -0.4
Rif1Q6PR54 Gm9823-201ENSMUST00000051212 327 ntBASIC12.57□□□□□ -0.4
Rif1Q6PR54 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Gm38158-201ENSMUST00000194617 339 ntBASIC12.57□□□□□ -0.4
Rif1Q6PR54 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.57□□□□□ -0.4
Rif1Q6PR54 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rif1Q6PR54 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.57□□□□□ -0.4
Rif1Q6PR54 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.57□□□□□ -0.4
Rif1Q6PR54 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Snord83b-201ENSMUST00000104546 94 ntBASIC12.56□□□□□ -0.4
Rif1Q6PR54 Mir1897-201ENSMUST00000122581 272 ntBASIC12.56□□□□□ -0.4
Rif1Q6PR54 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Gm24514-201ENSMUST00000174961 285 ntBASIC12.56□□□□□ -0.4
Rif1Q6PR54 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rif1Q6PR54 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms