Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm27838-201ENSMUST00000184829 128 ntBASIC17.44■□□□□ 0.38
Nup98Q6PFD9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Gm14042-201ENSMUST00000120139 833 ntBASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Gm9522-201ENSMUST00000182394 926 ntBASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Syt7-204ENSMUST00000223586 1344 ntBASIC17.43■□□□□ 0.38
Nup98Q6PFD9 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.43■□□□□ 0.38
Nup98Q6PFD9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.42■□□□□ 0.38
Nup98Q6PFD9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup98Q6PFD9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Gm6912-201ENSMUST00000117218 544 ntBASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Gm12490-201ENSMUST00000120255 560 ntBASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Gm33320-201ENSMUST00000192232 530 ntBASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup98Q6PFD9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms