Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Gm11745-201ENSMUST00000121669 448 ntBASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Gm45612-201ENSMUST00000211320 160 ntBASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Gm8396-201ENSMUST00000057361 823 ntBASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc46a1Q6PEM8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Gm16198-201ENSMUST00000118766 670 ntBASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Gm13365-201ENSMUST00000121188 973 ntBASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc46a1Q6PEM8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms