Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.87□□□□□ -0.19
VcanQ62059 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.87□□□□□ -0.19
VcanQ62059 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.87□□□□□ -0.19
VcanQ62059 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VcanQ62059 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
VcanQ62059 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VcanQ62059 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.86□□□□□ -0.19
VcanQ62059 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Gm12341-201ENSMUST00000119724 503 ntBASIC13.86□□□□□ -0.19
VcanQ62059 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Gm29787-201ENSMUST00000222129 849 ntBASIC13.86□□□□□ -0.19
VcanQ62059 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VcanQ62059 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.86□□□□□ -0.19
VcanQ62059 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VcanQ62059 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VcanQ62059 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.86□□□□□ -0.19
VcanQ62059 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.86□□□□□ -0.19
VcanQ62059 Gm17794-201ENSMUST00000220252 955 ntBASIC13.86□□□□□ -0.19
VcanQ62059 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VcanQ62059 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
VcanQ62059 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VcanQ62059 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcanQ62059 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.85□□□□□ -0.19
VcanQ62059 Mir7032-201ENSMUST00000185154 79 ntBASIC13.85□□□□□ -0.19
VcanQ62059 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
VcanQ62059 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VcanQ62059 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VcanQ62059 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VcanQ62059 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.85□□□□□ -0.19
VcanQ62059 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VcanQ62059 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.85□□□□□ -0.19
VcanQ62059 Mir5132-201ENSMUST00000175166 71 ntBASIC13.85□□□□□ -0.19
VcanQ62059 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.85□□□□□ -0.19
VcanQ62059 Gm9229-201ENSMUST00000222777 126 ntBASIC13.85□□□□□ -0.19
VcanQ62059 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VcanQ62059 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
VcanQ62059 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VcanQ62059 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.84□□□□□ -0.19
VcanQ62059 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.84□□□□□ -0.19
VcanQ62059 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.84□□□□□ -0.19
VcanQ62059 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VcanQ62059 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms