Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gli3Q61602 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gli3Q61602 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gli3Q61602 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Gli3Q61602 Gm15376-201ENSMUST00000122258 783 ntBASIC19.87■□□□□ 0.77
Gli3Q61602 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC19.87■□□□□ 0.77
Gli3Q61602 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gli3Q61602 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gli3Q61602 AC133598.1-201ENSMUST00000224327 660 ntBASIC19.87■□□□□ 0.77
Gli3Q61602 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Gli3Q61602 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Gli3Q61602 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gli3Q61602 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Gli3Q61602 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gli3Q61602 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gli3Q61602 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gli3Q61602 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gli3Q61602 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gli3Q61602 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gli3Q61602 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Gli3Q61602 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gli3Q61602 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.86■□□□□ 0.77
Gli3Q61602 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.86■□□□□ 0.77
Gli3Q61602 Gm13689-201ENSMUST00000119360 685 ntBASIC19.86■□□□□ 0.77
Gli3Q61602 Gm2639-201ENSMUST00000156881 1297 ntBASIC19.86■□□□□ 0.77
Gli3Q61602 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC19.86■□□□□ 0.77
Gli3Q61602 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC19.86■□□□□ 0.77
Gli3Q61602 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Gli3Q61602 Ighv1-25-201ENSMUST00000195638 345 ntBASIC19.86■□□□□ 0.77
Gli3Q61602 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Gli3Q61602 CT573034.1-201ENSMUST00000222983 313 ntBASIC19.86■□□□□ 0.77
Gli3Q61602 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gli3Q61602 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.86■□□□□ 0.77
Gli3Q61602 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.85■□□□□ 0.77
Gli3Q61602 Celf4-206ENSMUST00000224553 1729 ntBASIC19.85■□□□□ 0.77
Gli3Q61602 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Gli3Q61602 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Gli3Q61602 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC19.85■□□□□ 0.77
Gli3Q61602 Gm44364-201ENSMUST00000198368 141 ntBASIC19.85■□□□□ 0.77
Gli3Q61602 Olfr286-202ENSMUST00000205305 969 ntBASIC19.85■□□□□ 0.77
Gli3Q61602 Gm5425-201ENSMUST00000214125 459 ntBASIC19.85■□□□□ 0.77
Gli3Q61602 AC192088.1-201ENSMUST00000227561 301 ntBASIC19.85■□□□□ 0.77
Gli3Q61602 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gli3Q61602 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 Gm15240-201ENSMUST00000118156 720 ntBASIC19.84■□□□□ 0.77
Gli3Q61602 Gm2383-201ENSMUST00000181461 807 ntBASIC19.84■□□□□ 0.77
Gli3Q61602 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC19.84■□□□□ 0.77
Gli3Q61602 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gli3Q61602 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Gli3Q61602 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gli3Q61602 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC19.83■□□□□ 0.77
Gli3Q61602 Gm12749-201ENSMUST00000122138 1159 ntBASIC19.83■□□□□ 0.77
Gli3Q61602 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Gli3Q61602 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC19.83■□□□□ 0.77
Gli3Q61602 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gli3Q61602 Gm6983-201ENSMUST00000214912 628 ntBASIC19.83■□□□□ 0.77
Gli3Q61602 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Gli3Q61602 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
Gli3Q61602 AC140406.1-201ENSMUST00000226481 465 ntBASIC19.83■□□□□ 0.77
Gli3Q61602 Mir433-201ENSMUST00000093564 124 ntBASIC19.83■□□□□ 0.77
Gli3Q61602 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gli3Q61602 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gli3Q61602 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gli3Q61602 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 Gm12997-201ENSMUST00000120207 640 ntBASIC19.83■□□□□ 0.76
Gli3Q61602 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 Gm26464-201ENSMUST00000157094 305 ntBASIC19.83■□□□□ 0.76
Gli3Q61602 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gli3Q61602 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC19.83■□□□□ 0.76
Gli3Q61602 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC19.83■□□□□ 0.76
Gli3Q61602 Rps4l-202ENSMUST00000204242 789 ntBASIC19.83■□□□□ 0.76
Gli3Q61602 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms