Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Mir5122-201ENSMUST00000175004 89 ntBASIC17.95■□□□□ 0.46
Mre11Q61216 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Mre11Q61216 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Mre11Q61216 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.95■□□□□ 0.46
Mre11Q61216 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Mre11Q61216 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Mre11Q61216 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Mre11Q61216 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Mre11Q61216 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Mre11Q61216 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.94■□□□□ 0.46
Mre11Q61216 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.94■□□□□ 0.46
Mre11Q61216 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Mre11Q61216 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Mre11Q61216 Gm2274-201ENSMUST00000184539 609 ntBASIC17.94■□□□□ 0.46
Mre11Q61216 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.94■□□□□ 0.46
Mre11Q61216 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Mre11Q61216 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Mre11Q61216 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mre11Q61216 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.93■□□□□ 0.46
Mre11Q61216 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.93■□□□□ 0.46
Mre11Q61216 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Gm37055-201ENSMUST00000191866 133 ntBASIC17.93■□□□□ 0.46
Mre11Q61216 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.93■□□□□ 0.46
Mre11Q61216 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Mre11Q61216 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.93■□□□□ 0.46
Mre11Q61216 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.93■□□□□ 0.46
Mre11Q61216 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.93■□□□□ 0.46
Mre11Q61216 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mre11Q61216 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.92■□□□□ 0.46
Mre11Q61216 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.92■□□□□ 0.46
Mre11Q61216 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Mre11Q61216 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Mre11Q61216 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.92■□□□□ 0.46
Mre11Q61216 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.92■□□□□ 0.46
Mre11Q61216 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC17.92■□□□□ 0.46
Mre11Q61216 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mre11Q61216 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.92■□□□□ 0.46
Mre11Q61216 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms