Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Scnn1aQ61180 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.17■□□□□ 0.34
Scnn1aQ61180 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Gm25144-201ENSMUST00000179561 110 ntBASIC17.17■□□□□ 0.34
Scnn1aQ61180 Gm25352-201ENSMUST00000179815 110 ntBASIC17.17■□□□□ 0.34
Scnn1aQ61180 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Gm45098-201ENSMUST00000207179 657 ntBASIC17.17■□□□□ 0.34
Scnn1aQ61180 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.17■□□□□ 0.34
Scnn1aQ61180 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scnn1aQ61180 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Gm8410-201ENSMUST00000117225 605 ntBASIC17.16■□□□□ 0.34
Scnn1aQ61180 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.16■□□□□ 0.34
Scnn1aQ61180 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Asic1-205ENSMUST00000228185 1818 ntBASIC17.16■□□□□ 0.34
Scnn1aQ61180 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scnn1aQ61180 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.15■□□□□ 0.34
Scnn1aQ61180 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.15■□□□□ 0.34
Scnn1aQ61180 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scnn1aQ61180 BC037039-201ENSMUST00000192003 2205 ntBASIC17.15■□□□□ 0.34
Scnn1aQ61180 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Gm13823-201ENSMUST00000119930 345 ntBASIC17.14■□□□□ 0.33
Scnn1aQ61180 Gm38294-201ENSMUST00000192831 381 ntBASIC17.14■□□□□ 0.33
Scnn1aQ61180 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scnn1aQ61180 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scnn1aQ61180 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms