Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.57□□□□□ -0.08
Col12a1Q60847 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.57□□□□□ -0.08
Col12a1Q60847 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Col12a1Q60847 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col12a1Q60847 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col12a1Q60847 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.56□□□□□ -0.08
Col12a1Q60847 Gm5479-201ENSMUST00000160578 435 ntBASIC14.56□□□□□ -0.08
Col12a1Q60847 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.56□□□□□ -0.08
Col12a1Q60847 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.56□□□□□ -0.08
Col12a1Q60847 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.56□□□□□ -0.08
Col12a1Q60847 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col12a1Q60847 Gm8463-201ENSMUST00000208573 613 ntBASIC14.56□□□□□ -0.08
Col12a1Q60847 Mir125a-201ENSMUST00000083545 68 ntBASIC14.56□□□□□ -0.08
Col12a1Q60847 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col12a1Q60847 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col12a1Q60847 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col12a1Q60847 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm6222-201ENSMUST00000120787 396 ntBASIC14.55□□□□□ -0.08
Col12a1Q60847 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm27516-201ENSMUST00000184237 98 ntBASIC14.55□□□□□ -0.08
Col12a1Q60847 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.55□□□□□ -0.08
Col12a1Q60847 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col12a1Q60847 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.55□□□□□ -0.08
Col12a1Q60847 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.55□□□□□ -0.08
Col12a1Q60847 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm27243-201ENSMUST00000183964 521 ntBASIC14.55□□□□□ -0.08
Col12a1Q60847 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.55□□□□□ -0.08
Col12a1Q60847 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col12a1Q60847 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.55□□□□□ -0.08
Col12a1Q60847 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm37259-201ENSMUST00000193903 849 ntBASIC14.55□□□□□ -0.08
Col12a1Q60847 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Gm9823-201ENSMUST00000051212 327 ntBASIC14.55□□□□□ -0.08
Col12a1Q60847 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col12a1Q60847 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.54□□□□□ -0.08
Col12a1Q60847 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.54□□□□□ -0.08
Col12a1Q60847 Gm8652-201ENSMUST00000181363 964 ntBASIC14.54□□□□□ -0.08
Col12a1Q60847 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.54□□□□□ -0.08
Col12a1Q60847 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col12a1Q60847 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms