Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Gm26971-201ENSMUST00000182423 1072 ntBASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav3-1Q5R1I8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Gm12366-201ENSMUST00000121722 873 ntBASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Gm5786-201ENSMUST00000085368 882 ntBASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav3-1Q5R1I8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Trav3-1Q5R1I8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms