Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Gm28760-201ENSMUST00000185995 736 ntBASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Celf4-206ENSMUST00000224553 1729 ntBASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav8d-2Q5R1B6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Mir1938-201ENSMUST00000158746 100 ntBASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Mir7085-201ENSMUST00000184353 66 ntBASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Gm45453-201ENSMUST00000211758 853 ntBASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Gm18624-201ENSMUST00000220966 658 ntBASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Gm9899-201ENSMUST00000065519 555 ntBASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav8d-2Q5R1B6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Gm9797-201ENSMUST00000052902 613 ntBASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav8d-2Q5R1B6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 Gm6266-201ENSMUST00000203844 806 ntBASIC14.48□□□□□ -0.09
Trav8d-2Q5R1B6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms