Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf20Q5DTM8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf20Q5DTM8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf20Q5DTM8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Gm12350-201ENSMUST00000121208 462 ntBASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Gm27628-201ENSMUST00000184911 107 ntBASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Gm2651-201ENSMUST00000203560 838 ntBASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Rnf20Q5DTM8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Gm27741-201ENSMUST00000185060 237 ntBASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf20Q5DTM8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms