Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Scn2bQ56A07 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44357-201ENSMUST00000195897 142 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm19658-201ENSMUST00000196231 138 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44367-201ENSMUST00000196836 138 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44350-201ENSMUST00000197197 138 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44390-201ENSMUST00000197533 144 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44313-201ENSMUST00000198018 138 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44486-201ENSMUST00000198508 138 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44314-201ENSMUST00000199263 138 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44394-201ENSMUST00000199558 138 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44484-201ENSMUST00000199873 138 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44466-201ENSMUST00000200264 138 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm44359-201ENSMUST00000200671 138 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.82□□□□□ -0.04
Scn2bQ56A07 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Gm11780-201ENSMUST00000136880 516 ntBASIC14.81□□□□□ -0.04
Scn2bQ56A07 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn2bQ56A07 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Gm12134-201ENSMUST00000122109 520 ntBASIC14.8□□□□□ -0.04
Scn2bQ56A07 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.8□□□□□ -0.04
Scn2bQ56A07 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.8□□□□□ -0.04
Scn2bQ56A07 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.8□□□□□ -0.04
Scn2bQ56A07 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.8□□□□□ -0.04
Scn2bQ56A07 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms