Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rc3h1Q4VGL6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Gm11543-201ENSMUST00000120758 370 ntBASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 AA543401-201ENSMUST00000164248 1269 ntBASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rc3h1Q4VGL6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rc3h1Q4VGL6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rc3h1Q4VGL6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Gm22175-201ENSMUST00000175007 78 ntBASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Gm24158-201ENSMUST00000175263 71 ntBASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Gm10253-201ENSMUST00000194270 940 ntBASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rc3h1Q4VGL6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rc3h1Q4VGL6 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms