Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap2Q3V1H1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap2Q3V1H1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap2Q3V1H1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap2Q3V1H1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap2Q3V1H1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap2Q3V1H1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap2Q3V1H1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ckap2Q3V1H1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ckap2Q3V1H1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.14■□□□□ 0.34
Ckap2Q3V1H1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.14■□□□□ 0.34
Ckap2Q3V1H1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ckap2Q3V1H1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Gm20553-201ENSMUST00000204205 844 ntBASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ckap2Q3V1H1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Gm25911-201ENSMUST00000157621 56 ntBASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Gm45612-201ENSMUST00000211320 160 ntBASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ckap2Q3V1H1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ckap2Q3V1H1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms