Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.36■□□□□ 0.37
Cdkl5Q3UTQ8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Gm12008-201ENSMUST00000117791 755 ntBASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl5Q3UTQ8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Efs-202ENSMUST00000227037 2540 ntBASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdkl5Q3UTQ8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl5Q3UTQ8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl5Q3UTQ8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl5Q3UTQ8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl5Q3UTQ8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl5Q3UTQ8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Cdkl5Q3UTQ8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl5Q3UTQ8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl5Q3UTQ8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl5Q3UTQ8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl5Q3UTQ8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl5Q3UTQ8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl5Q3UTQ8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl5Q3UTQ8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms