Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.43□□□□□ -0.42
Znf48Q3US17 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.43□□□□□ -0.42
Znf48Q3US17 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.43□□□□□ -0.42
Znf48Q3US17 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC12.43□□□□□ -0.42
Znf48Q3US17 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.43□□□□□ -0.42
Znf48Q3US17 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.43□□□□□ -0.42
Znf48Q3US17 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Znf48Q3US17 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.43□□□□□ -0.42
Znf48Q3US17 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Znf48Q3US17 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Znf48Q3US17 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Znf48Q3US17 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Znf48Q3US17 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.42□□□□□ -0.42
Znf48Q3US17 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Znf48Q3US17 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.42□□□□□ -0.42
Znf48Q3US17 Gm25116-201ENSMUST00000157191 122 ntBASIC12.42□□□□□ -0.42
Znf48Q3US17 Gm43377-201ENSMUST00000201640 455 ntBASIC12.42□□□□□ -0.42
Znf48Q3US17 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.42□□□□□ -0.42
Znf48Q3US17 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.42□□□□□ -0.42
Znf48Q3US17 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.42□□□□□ -0.42
Znf48Q3US17 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Znf48Q3US17 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.42□□□□□ -0.42
Znf48Q3US17 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Znf48Q3US17 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Znf48Q3US17 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Znf48Q3US17 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.42□□□□□ -0.42
Znf48Q3US17 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.41□□□□□ -0.42
Znf48Q3US17 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Znf48Q3US17 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Znf48Q3US17 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Znf48Q3US17 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Znf48Q3US17 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.41□□□□□ -0.42
Znf48Q3US17 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Gm7430-201ENSMUST00000193824 1144 ntBASIC12.41□□□□□ -0.42
Znf48Q3US17 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.41□□□□□ -0.42
Znf48Q3US17 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.41□□□□□ -0.42
Znf48Q3US17 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Znf48Q3US17 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.41□□□□□ -0.42
Znf48Q3US17 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Znf48Q3US17 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Znf48Q3US17 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Znf48Q3US17 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Znf48Q3US17 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Znf48Q3US17 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Znf48Q3US17 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Znf48Q3US17 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Znf48Q3US17 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Znf48Q3US17 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Znf48Q3US17 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms