Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Gm16026-204ENSMUST00000162652 683 ntBASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Gm18057-201ENSMUST00000208220 503 ntBASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Naf1Q3UMQ8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Gm13616-201ENSMUST00000120600 222 ntBASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Naf1Q3UMQ8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Naf1Q3UMQ8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Naf1Q3UMQ8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Naf1Q3UMQ8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Naf1Q3UMQ8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Naf1Q3UMQ8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Gm6973-201ENSMUST00000117080 721 ntBASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Auts2-212ENSMUST00000178555 309 ntBASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Celf4-206ENSMUST00000224553 1729 ntBASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Naf1Q3UMQ8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms