Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Rps4l-202ENSMUST00000204242 789 ntBASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Gm45880-201ENSMUST00000213041 853 ntBASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Gm29649-201ENSMUST00000185649 419 ntBASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.68□□□□□ -0.22
Spg11Q3UHA3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Mir877-201ENSMUST00000104738 85 ntBASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Gm12997-201ENSMUST00000120207 640 ntBASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Gm38002-201ENSMUST00000193255 180 ntBASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Gm38158-201ENSMUST00000194617 339 ntBASIC13.67□□□□□ -0.22
Spg11Q3UHA3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Spg11Q3UHA3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Gm37986-201ENSMUST00000193285 383 ntBASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Gm38341-201ENSMUST00000195357 515 ntBASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Spg11Q3UHA3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Spg11Q3UHA3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms