Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ctdnep1Q3TP92 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ctdnep1Q3TP92 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctdnep1Q3TP92 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctdnep1Q3TP92 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.27■□□□□ 0.35
Ctdnep1Q3TP92 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctdnep1Q3TP92 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctdnep1Q3TP92 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctdnep1Q3TP92 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ctdnep1Q3TP92 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Gm17968-201ENSMUST00000194902 784 ntBASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ctdnep1Q3TP92 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Gm16198-201ENSMUST00000118766 670 ntBASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Gm23547-201ENSMUST00000158210 271 ntBASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Gm18733-201ENSMUST00000173950 856 ntBASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ctdnep1Q3TP92 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Psmb5-202ENSMUST00000227257 622 ntBASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ctdnep1Q3TP92 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms