Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.74□□□□□ -0.05
Q3KNL4 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.74□□□□□ -0.05
Q3KNL4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.74□□□□□ -0.05
Q3KNL4 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.74□□□□□ -0.05
Q3KNL4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Q3KNL4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.73□□□□□ -0.05
Q3KNL4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.73□□□□□ -0.05
Q3KNL4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.73□□□□□ -0.05
Q3KNL4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Q3KNL4 Gm18669-201ENSMUST00000216049 778 ntBASIC14.73□□□□□ -0.05
Q3KNL4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Q3KNL4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Q3KNL4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Q3KNL4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Q3KNL4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Q3KNL4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Q3KNL4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.72□□□□□ -0.05
Q3KNL4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.72□□□□□ -0.05
Q3KNL4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.72□□□□□ -0.05
Q3KNL4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Q3KNL4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
Q3KNL4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Q3KNL4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.71□□□□□ -0.05
Q3KNL4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.71□□□□□ -0.05
Q3KNL4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Q3KNL4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Q3KNL4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Q3KNL4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.71□□□□□ -0.05
Q3KNL4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Q3KNL4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Q3KNL4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Q3KNL4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Q3KNL4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Q3KNL4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.71□□□□□ -0.06
Q3KNL4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Q3KNL4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Q3KNL4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Q3KNL4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Q3KNL4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Q3KNL4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
Q3KNL4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.7□□□□□ -0.06
Q3KNL4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Q3KNL4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms