Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Ank2-226ENSMUST00000189368 339 ntBASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ptchd3Q0EEE2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Gm25745-201ENSMUST00000174945 133 ntBASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ptchd3Q0EEE2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Gm12895-201ENSMUST00000122214 226 ntBASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ptchd3Q0EEE2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ptchd3Q0EEE2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms