Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Gm11793-201ENSMUST00000120433 981 ntBASIC13.27□□□□□ -0.29
Chd8Q09XV5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Gm6334-201ENSMUST00000207083 228 ntBASIC13.27□□□□□ -0.29
Chd8Q09XV5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Snora73a-201ENSMUST00000082453 205 ntBASIC13.27□□□□□ -0.29
Chd8Q09XV5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.27□□□□□ -0.29
Chd8Q09XV5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Gm14017-201ENSMUST00000121934 386 ntBASIC13.27□□□□□ -0.29
Chd8Q09XV5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Gm9550-201ENSMUST00000161130 862 ntBASIC13.27□□□□□ -0.29
Chd8Q09XV5 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Gm18935-201ENSMUST00000212692 664 ntBASIC13.27□□□□□ -0.29
Chd8Q09XV5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd8Q09XV5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm12616-201ENSMUST00000118594 382 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm12624-201ENSMUST00000177615 382 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm12621-201ENSMUST00000177760 382 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm12615-201ENSMUST00000177970 382 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm12622-201ENSMUST00000177975 382 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm12627-201ENSMUST00000178412 382 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm12625-201ENSMUST00000179122 382 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm12614-201ENSMUST00000179586 382 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm12613-201ENSMUST00000180323 382 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.26□□□□□ -0.29
Chd8Q09XV5 Gm43378-201ENSMUST00000199336 582 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.26□□□□□ -0.29
Chd8Q09XV5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Gm20482-202ENSMUST00000174729 825 ntBASIC13.25□□□□□ -0.29
Chd8Q09XV5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Gm45453-201ENSMUST00000211758 853 ntBASIC13.25□□□□□ -0.29
Chd8Q09XV5 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.25□□□□□ -0.29
Chd8Q09XV5 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.25□□□□□ -0.29
Chd8Q09XV5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.25□□□□□ -0.29
Chd8Q09XV5 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.25□□□□□ -0.29
Chd8Q09XV5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.25□□□□□ -0.29
Chd8Q09XV5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd8Q09XV5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms